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GrainGenes Map Data Report: Oat-2007-OxT-PcQTL

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Map Data	Oat-2007-OxT-PcQTL
Map	Oat-2007-OxT_2 Oat-2007-OxT_32 Oat-2007-OxT_6
Species	Avena sativa
Parent	Ogle (oat) TAM O-301 (oat)
Type	genetic
Map Units	cM
Reference	Jackson EW et al. (2007) Characterization and Mapping of Oat Crown Rust Resistance Genes Using Three Assessment Methods Phytopathology 97:1063-1070.
Contact	Wight, Charlene
Remarks	(Curator Note. VCB 12/2020) On the OT6 map in figure 4 in the paper, the RFLP labeled as CDO640A, colocalizing with ISU54B should be CDO460A, as seen on Oat-OxT-6. This was discovered since there is no locus or probe record for 'cdo460' in GrainGenes in 2020. Synonyms were added to RFLP markers that were in GrainGenes in the previous 'X' format. 'X' indicates unknown function for early molecular markers, but was dropped as noted in the Introduction of the Catalog of Gene Symbols for Wheat. By adding synonyms to the markers, the functionality of cMap is improved.
Data Curator	Blake, Victoria Carollo
QTL	QPcq.OxT2007_2 [ Show all 7 ]
Locus	[ Hide all but 1 of 68 ] A03.875 A04.360 A17.350 aa03.875 aa04.360 aa17.350 Acp2 Adh2C BCD1087 BCD1235C BCD1235D BCD1280B BCD349 BCD855 CDO1090C CDO1373A CDO1467A CDO216D CDO395 CDO407 CDO460A CDO460B CDO470B CDO545B CDO595 CDO949 e35m61-101.o e35m61-122.t e35m61-238.o e40m48-242.o ISU107B ISU136E ISU54B ISU77D Pc58a PcD PcQ PcV Pgd2 PIC20B PSR160B PSR167 PSR547 PSR598 PSR637 RZ143Z RZ516A RZ543 Skdh Xbcd1087 Xbcd1280B Xbcd349 Xbcd855 Xcdo1090C Xcdo1373a Xcdo1467A Xcdo395 Xcdo407 Xcdo460A Xcdo460B Xcdo545b Xcdo595 Xcdo949 Xpsr167 Xpsr547 Xpsr598 Xpsr637 Xrz543

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