Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Map Data Report: Wheat-2019-KASP_YldQTL

[Submit comment/correction]

Map Data	Wheat-2019-KASP_YldQTL
Map	Wheat-2019-KASP_YldQTL_1A Wheat-2019-KASP_YldQTL_2B Wheat-2019-KASP_YldQTL_3A Wheat-2019-KASP_YldQTL_5A
Species	Triticum aestivum
Parent	Zhongmai 871 Zhongmai 895
Type	genetic
Reference	Yang L et al. (2020) QTL mapping for grain yield-related traits in bread wheat via SNP-based selective genotyping Theoretical and Applied Genetics 133:857-872.
Remarks	Two sets of materials used for QTL validation. Backcross (BC1) F4 populations ZM871/ZM895//ZM871 and ZM871/ZM895//ZM895 of 121 and 175 RILs, resp., and 186 advanced breeding lines. The genetic maps used for QTL confirmation were constructed with JoinMap 4.0 using 26 KASP markers that were converted from SNP markers closely linked to preliminarily identified QTL. QTL analysis was performed by inclusive composite interval mapping (ICIM) using IciMapping 4.1. Phenotypic data obtained from individual environments and the best linear unbiased estimators (BLUEs) across 10 (TGW, GL, GW, and GNS) or six (GFR) environments were used for QTL detection. A LOD threshold of 2.0 was set based on 1000 permutation tests at P < 0.01.
Data Curator	Blake, Victoria Carollo Jan 2020
QTL	Qtgw.caas-1AL [ Show all 15 ]
Locus	[ Hide all but 1 of 26 ] Kasp_1A10 Kasp_1A58 Kasp_1A64 Kasp_1A90 Kasp_2B13 Kasp_2B16 Kasp_2B51 Kasp_2B55 Kasp_2B58 Kasp_2B72 Kasp_3A10 Kasp_3A11 Kasp_3A14 Kasp_3A5 Kasp_3A7 Kasp_3A8 Kasp_3A9 Kasp_5B11 Kasp_5B12 Kasp_5B2 Kasp_5B3 Kasp_5B4 Kasp_5B5 Kasp_5B6 Kasp_5B8 Kasp_5B9

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.