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GrainGenes Marker Report: ABC157

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Locus	ABC157
Type	Gene RFLP
Synonym	Synonym lpa1 (Hordeum)
Chromosome	2H
Chromosome Arm	2HL
Map	[ Hide all but 1 of 20 ] Barley-consensus-2003-2H 122.1 Barley-Consensus-2H 56.8 Barley-Consensus2-2H 131.3 Barley-ConsensusFHB-2H 127.53 Hordeum-Bins-2H 146.4 Hordeum-Consensus2005-SNP-2H 129.987 Hordeum-Consensus2006-DArT-2H 139.5 Hordeum-CxS-2H 174.32 Hordeum-HxM-base-2H 147.3 Hordeum-KxM-2H 200.4 Hordeum-NABGMP1-2H 147.6 Hordeum-QTLConsensus-Abiotic-2H 129.99 Hordeum-QTLConsensus-Agronomic-2H 129.99 Hordeum-StMo-SNP-2H 130 Hordeum-SxM-base-2H 143.7 Hordeum-SxM-FeedQTL-2H 147.6 Hordeum-SxM-SSAP-2H 146.3 Hordeum-SxM-SSR-2H 170.2 Hv-Consensus2006-Marcel-2H 129.84 Hv-Integrated2009-2H 130.6
	[ Show Nearby Loci ]
QTL with Locus Marker	QHt.StMo-2H.2
Map Data	Barley consensus [ Show all 20 ]
Probe	ABC157
Associated Gene	lpa1 (Hordeum)
Reference	Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027. Larson SR et al. (1998) Linkage mapping of two mutations that reduce phytic acid content of barley grain. Theoretical and Applied Genetics 97:141-146.
Data Source	Blake, Tom 05.04.19 Langridge, Peter J.
Remark	Number of populations contributing to the placement of ABC157 in the Barley, Consensus 2006 DArT maps = 2 The ABC157 RFLP/STS is a gene marker for the lpa1 (Hordeum) gene Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Gene Associated with Locus	lpa1 (Hordeum)
Locus	ABC157
Probe	ABC157
Locus	ABC157
Remarks	Steptoe malt cDNA
Type	cDNA
Linkage Group	Group 2 2
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.3