Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: ABC161

[Submit comment/correction]

Locus	ABC161
Type	RFLP
Synonym	Synonym ABC161
Chromosome	3H
Chromosome Arm	3HL
Map	[ Hide all but 1 of 21 ] Barley-Consensus-3H 66 Barley-Consensus2-3H 96.6 Barley-ConsensusFHB-3H 132.29 Hordeum-Bins-3H 150.9 Hordeum-Consensus2005-SNP-3H 129.008 Hordeum-Consensus2006-DArT-3H 136.3 Hordeum-Consensus2007-SSR-3H 121.18 Hordeum-CxB-3H 143.5 Hordeum-Graner2-3H 117.3 Hordeum-IxF-SSR-3H 90.2 Hordeum-NABGMP1-3H 168.8 Hordeum-OPA-2009-3H 203.38 Hordeum-PilotOPA1-3H 136.25 Hordeum-QTLConsensus-Abiotic-3H 129.01 Hordeum-QTLConsensus-Agronomic-3H 129.01 Hordeum-StMo-SNP-3H 129.49 Hordeum-SxM-base-3H 151 Hordeum-SxM-FeedQTL-3H 168.8 Hordeum-SxM-SSAP-3H 140.5 Hv-Consensus2006-Marcel-3H 121.18 Hv-Integrated2009-3H 133
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 21 ]
Species	Hordeum vulgare
Probe	ABC161
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 6 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of ABC161 in the Barley, Consensus 2006 DArT maps = 1 [ Show all 6 ]
Possible Orthologs	ABC161-3H Xabc161 Xabc161-3
Probe	ABC161
Locus	Xabc161-3 ABC161 Xabc161 ABC161-3H
Synonym	Synonym HAR35_32715 HAR35_3702 HAR35_39058
External Databases	DDBJ EMBL GenBank
Remarks	Steptoe malt cDNA
Type	cDNA STS
PCR primers	TTG TCA AAC ATG GAT TGT GT CGC CTC GGG GTC AAG ATT TA
Sequence	L43930 ABC161 ABC161-5
Linkage Group	Group 3 3
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	malt
Insert Size	0.6