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GrainGenes Marker Report: ABC161

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Locus
ABC161
Type
RFLP
Synonym
SynonymABC161
Chromosome
3H
Chromosome Arm
3HL
Map
Barley-Consensus-3H66
[ Show all 21 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 21 ]
Species
Hordeum vulgare
Probe
ABC161
Reference
[ Hide all but 1 of 6 ]
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of ABC161 in the Barley, Consensus 2006 DArT maps = 1
[ Show all 6 ]
Possible Orthologs
ABC161-3H
Xabc161
Xabc161-3


Probe
ABC161
Locus
Xabc161-3
ABC161
Xabc161
ABC161-3H
Synonym
SynonymHAR35_32715
HAR35_3702
HAR35_39058
External Databases
DDBJ
EMBL
GenBank
Remarks
Steptoe malt cDNA
Type
cDNA
STS
PCR primers
TTG TCA AAC ATG GAT TGT GT
CGC CTC GGG GTC AAG ATT TA
Sequence
L43930
ABC161
ABC161-5
Linkage Group
Group 3
3
Source Species
Hordeum vulgare
Source Germplasm
Steptoe (barley)
Source Tissue
malt
Insert Size
0.6