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GrainGenes Marker Report: ABC302

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Locus	ABC302
Type	RFLP
Synonym	Synonym ABC302 ABC302A
Chromosome	5H
Chromosome Arm	5HL
Map	[ Hide all but 1 of 27 ] Barley-Consensus-5H 16.9 Barley-Consensus2-5H 75.6 Barley-ConsensusFHB-5H 83.09 Hordeum-Bins-5H 83.2 Hordeum-Consensus2005-SNP-5H 79.787 Hordeum-Consensus2006-DArT-5H 73.6 Hordeum-Consensus2007-SSR-5H 66.62 Hordeum-DxM-5H 71.7 Hordeum-DxM-Dnh-5H 71.7 Hordeum-Graner2-5H 58.3 Hordeum-IxF-SSR-5H 28 Hordeum-KxM-5H 104.7 Hordeum-NABGMP1-5H 78.2 Hordeum-OPA-2009-5H 124.5 Hordeum-OWB-2004-5H 70.5 Hordeum-OWB-2005-5H 78.7 Hordeum-OWB-5H 68.3 Hordeum-OWB-OPA2008-5H 91.639 Hordeum-OWB-SNP-5H 34.53 Hordeum-QTLConsensus-Abiotic-5H 79.79 Hordeum-QTLConsensus-Agronomic-5H 79.79 Hordeum-SxM-base-5H 78.3 Hordeum-SxM-FeedQTL-5H 78.2 Hordeum-SxM-SSAP-5H 75.9 Hordeum-SxM-SSR-5H 82.8 Hv-Consensus2006-Marcel-5H 66.62 Hv-Integrated2009-5H 68.8
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.DON_5H_2 [ Show all 8 ]
Map Data	Barley consensus [ Show all 27 ]
Species	Hordeum vulgare
Probe	ABC302 Kaveh H et al. (1968) Allelic and linkage relations among genes for reaction to wheat stem rust. Agronomy Abstracts 12.
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 8 ]
Data Source	Blake, Tom 05.04.19
Remark	Number of populations contributing to the placement of ABC302 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABC302-5H ABC302A ABC302B
Probe	ABC302
Locus	ABC302 ABC302B ABC302A ABC302-5H
Synonym	Synonym HAR35_14926
Remarks	Steptoe malt cDNA
Type	cDNA STS
STS primers	5' CTGGTGCTTTCGATGCTGT 5' CTGAGTCTTCGCCATGCATA
STS size	ca. 1100
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	BQ548063 BQ548062 ABC302 ABC302-5 ABC302-3
Linkage Group	Group 7
Source Species	Hordeum vulgare
Insert Size	0.8