Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: ABC302

[Submit comment/correction]

Locus	ABC302
Type	RFLP
Synonym	Synonym ABC302 ABC302A
Chromosome	5H
Chromosome Arm	5HL
Map	Barley-Consensus-5H 16.9 [ Show all 27 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.DON_5H_2 [ Show all 8 ]
Map Data	[ Hide all but 1 of 27 ] Barley consensus Barley consensus 2 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Dicktoo x Morex Barley, DxM, Dhn genes Barley, Igri x Franka, SSR Barley, Integrated, Marcel 2009 Barley, IxF Barley, KxM Barley, OPA 2009, Consensus Barley, OWB Barley, OWB, 2004 Barley, OWB, 2005 Barley, OWB, OPA2008 Barley, OWB, SNP Barley, Steptoe x Morex, SSAP Barley, Steptoe x Morex, SSR Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	ABC302 Kaveh H et al. (1968) Allelic and linkage relations among genes for reaction to wheat stem rust. Agronomy Abstracts 12.
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. [ Show all 8 ]
Data Source	Blake, Tom 05.04.19
Remark	Number of populations contributing to the placement of ABC302 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABC302-5H ABC302A ABC302B
Probe	ABC302
Locus	ABC302 ABC302B ABC302A ABC302-5H
Synonym	Synonym HAR35_14926
Remarks	Steptoe malt cDNA
Type	cDNA STS
STS primers	5' CTGGTGCTTTCGATGCTGT 5' CTGAGTCTTCGCCATGCATA
STS size	ca. 1100
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	BQ548063 BQ548062 ABC302 ABC302-5 ABC302-3
Linkage Group	Group 7
Source Species	Hordeum vulgare
Insert Size	0.8