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GrainGenes Marker Report: ABC468

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Locus	ABC468
Type	RFLP
Synonym	Synonym ABC468
Chromosome	2H
Chromosome Arm	2HS
Map	[ Hide all but 1 of 18 ] Barley-consensus-2003-2H 69.4 Barley-Consensus-2H -1.2 Barley-Consensus2-2H 68.9 Barley-ConsensusFHB-2H 73.03 Hordeum-Bins-2H 69.2 Hordeum-Consensus2005-SNP-2H 64.522 Hordeum-Consensus2006-DArT-2H 71.2 Hordeum-Consensus2007-SSR-2H 68.76 Hordeum-CxH-2H 94.55 Hordeum-CxS-2H 77.29 Hordeum-GxH-2H 80.85 Hordeum-OPA-2009-2H 96.47 Hordeum-PilotOPA1-2H 66.659 Hordeum-QTLConsensus-Abiotic-2H 64.52 Hordeum-QTLConsensus-Agronomic-2H 64.52 Hordeum-StMo-SNP-2H 65.11 Hv-Consensus2006-Marcel-2H 68.76 Hv-Integrated2009-2H 66.2
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 20 ]
Species	Hordeum vulgare
Probe	ABC468
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Close, Timothy J. Langridge, Peter J.
Remark	Number of populations contributing to the placement of ABC468 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABC468-2H
Probe	ABC468
Locus	ABC468 ABC468-2H
External Databases	DDBJ EMBL GenBank
Remarks	Steptoe leaf cDNA
Type	cDNA STS
PCR primers	TGA GCA ATA CAG GGC TGA TG CCA CCA GAT AAC TCT TCA TA
Sequence	L43956 ABC468
Linkage Group	Group 2 2
Source Species	Hordeum vulgare
Source Germplasm	Steptoe (barley)
Source Tissue	leaf
Insert Size	0.8