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GrainGenes Marker Report: ABG377

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Locus	ABG377
Type	RFLP
Synonym	Synonym ABG377
Chromosome	3H
Chromosome Arm	3HL
Map	Barley-Consensus-3H 13.3 [ Show all 25 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QGpc.StMo-3H.2 QHd.BlE2-3H.1 QKp.StMo-3H QTw.StMo-3H QYld.StMo-3H.1
Map Data	[ Hide all but 1 of 25 ] Barley consensus Barley consensus 2 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Cali-sib x BowmanBC, QTL Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, IxF Barley, KxM Barley, OPA 2009, Consensus Barley, OWB, 2004 Barley, OWB, 2005 Barley, OWB, OPA2008 Barley, physical Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	ABG377
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. [ Show all 6 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of ABG377 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABG377-3H Xabg377 Xabg377-3
Probe	ABG377
Locus	ABG377 Xabg377-3 Xabg377 ABG377-3H
Synonym	Synonym HAR35_10264 HAR35_35535
External Databases	DDBJ EMBL GenBank
Reference	Kleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
PCR primers	GTG TTA CAG CCA CCT ATT TC GCT GCT ATG AGG AGA GAA CC
STS primers	5' CAGAGTTGTTAGGCCTGGAA 5' GACTCTTGGCCCTGCTCCAT
STS size	229
Amplification Conditions	STS annealing temperature 60-62 oC
Sequence	L43984 ABG377 ABG377-5
Linkage Group	3L 3
Source Species	Hordeum vulgare
Source Germplasm	Shin Ebisu 16
Insert Size	0.7