GrainGenes Marker Report: ABG396
Locus
ABG396
Type
RFLP
Synonym
Synonym Rh/Pt (Hordeum)
Chromosome
3H
Chromosome Arm
3HS
Map
Barley-Consensus-3H -3.4
[ Show all 17 ]
[ Show Nearby Loci ]
QTL with Locus Marker
MetaQ.FHB_3H_3
[ Show all 9 ]
Map Data
Barley consensus
[ Show all 17 ]
Species
Hordeum vulgare
Probe
ABG396
Associated Gene
Rh/Pt (Hordeum)
Reference
[ Hide all but 1 of 6 ] 
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Slilde WD et al. (2000) Development of a high resolution map for the Rhand Pt resistance on barley Chromosome 3H Barley Genetics VIII: Proceedings of the Eighth International Barley Genetics Symposium, October 22-27 2000, Adelaide, Australia 178-180.
Data Source
Blake, Tom 05.04.19 Close, Timothy J.
Remark
Number of populations contributing to the placement of ABG396 in the Barley, Consensus 2006 DArT maps = 1
[ Show all 6 ]
Possible Orthologs
ABG396-3H
[ Show all 7 ]
Gene Associated with Locus
Rh/Pt (Hordeum)
Locus
ABG396
Probe
ABG396
Locus
Xabg396-3
[ Show all 7 ]
Reference
Kleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Type
Genomic PCR
Sequence
ABG396
Linkage Group
3
Source Species
Hordeum vulgare
Source Germplasm
Shin Ebisu 16
Insert Size
0.5
GrainGenes Marker Report: ABG396
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