Query (optional)   in Class  

GrainGenes Marker Report: ABG398

[Submit comment/correction]

Locus
ABG398
Type
RFLP
Synonym
SynonymABG398
Chromosome
3H
Chromosome Arm
3HS
Map
[ Hide all but 1 of 11 ]
Barley-Consensus-3H-0.4
Barley-Consensus2-3H40.5
Hordeum-Bins-3H60
Hordeum-Consensus2005-SNP-3H50.65
Hordeum-NABGMP1-3H75.3
Hordeum-QTLConsensus-Abiotic-3H50.65
Hordeum-QTLConsensus-Agronomic-3H50.65
Hordeum-StMo-SNP-3H49.1
Hordeum-SxM-FeedQTL-3H75.3
Hv-Consensus2006-Marcel-3H48.42
Hv-Integrated2009-3H60
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 11 ]
Probe
ABG398
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
Xabg398-3



Probe
ABG398
Locus
Xabg398-3
ABG398
Synonym
SynonymHAR35_16766
External Databases
DDBJ
EMBL
GenBank
Reference
ReferenceKleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Type
Genomic
STS
PCR primers
AAGTGATGGAATTCAGAAAG
AAGCGGTTCCTTTTGTTACT
Sequence
L43992
ABG398
Linkage Group
3
Source Species
Hordeum vulgare
Source Germplasm
Shin Ebisu 16
Insert Size
0.4