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GrainGenes Marker Report: ABG461A

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Locus	ABG461A
Type	RFLP
Synonym	Synonym ABG461
Chromosome	7H
Map	Hordeum-Bins-7H 124.5 [ Show all 16 ]
	[ Show Nearby Loci ]
Map Data	[ Hide all but 1 of 16 ] Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Cali-sib x BowmanBC, QTL Barley, Consensus 2005, SNP Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Integrated, Marcel 2009 Barley, KxM Barley, OWB Barley, OWB, 2004 Barley, OWB, 2005 Barley, OWB, OPA2008 Barley, OWB, SNP Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP
Species	Hordeum vulgare
Probe	ABG461
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABG461 [ Show all 8 ]
Probe for Locus	ABG461
Locus	ABG461C [ Show all 9 ]
Synonym	Synonym HAR35_21952 HAR35_3657
External Databases	DDBJ EMBL GenBank
General Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
PCR primers	TAG AAG TAG AAA AAG GAA CC GAA GAA CAA CCA ATA GAA TG
STS primers	5' AGTTCAATGTTCACCACAGC 5' CAATGTACCGGACTATTTGG
STS size	283
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	L44024 ABG461 ABG461-5 ABG461-3
Linkage Group	Group 1
Source Species	Hordeum vulgare
Insert Size	1