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GrainGenes Marker Report: ABG472

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Locus	ABG472
Type	RFLP STS
Synonym	Synonym ABG472
Chromosome	4H
Chromosome Arm	4HL
Map	Barley-consensus-2003-4H 46.2 [ Show all 34 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.HD_4H_1 [ Show all 14 ]
Map Data	[ Hide all but 1 of 34 ] Barley consensus Barley consensus 2 Barley consensus 2003 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Cali-sib x BowmanBC, QTL Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2023, FHB Barley, CxH Barley, Dicktoo x Morex Barley, DxM, Dhn genes Barley, FxS, FHB QTL Barley, GxH Barley, HxM/QTL Barley, HxT Barley, HxT basemap Barley, Igri x Franka, SSR Barley, Integrated, Marcel 2009 Barley, IxF Barley, KxM Barley, OWB Barley, OWB, 2004 Barley, OWB, 2005 Barley, OWB, OPA2008 Barley, OWB, SNP Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, Steptoe x Morex, SSR Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	ABG472
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. [ Show all 7 ]
Data Source	Blake, Tom 05.04.19 Langridge, Peter J.
Remark	Number of populations contributing to the placement of ABG472 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka
Possible Orthologs	ABG472-4H ABG472A ABG472B
Probe	ABG472
Locus	ABG472 ABG472A ABG472B ABG472-4H
External Databases	DDBJ EMBL GenBank
Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
PCR primers	GGG ATT TGG AAA AAG TTT AT GGC GAA GAT GTC CTT AGA TA
STS primers	5' CCGCGTACGCGAATCTGAGT 5' GCCCAGCTAGGTCGACAATA
STS size	ca. 900
Amplification Conditions	STS annealing temperature 52-55 oC
Sequence	L44028 ABG472 ABG472-5 ABG472-3
Linkage Group	4L
Source Species	Hordeum vulgare
Insert Size	1