Query (optional)   in Class  

GrainGenes Marker Report: ABG473

[Submit comment/correction]

Locus
ABG473
Type
RFLP
STS
Synonym
SynonymABG473
Chromosome
5H
Chromosome Arm
5HL
Map
[ Hide all but 1 of 15 ]
Barley-Consensus-5H34.1
Barley-Consensus2-5H98.7
Barley-ConsensusFHB-5H102.38
Hordeum-Bins-5H107.1
Hordeum-Consensus2005-SNP-5H89.64
Hordeum-Consensus2007-SSR-5H90.57
Hordeum-NABGMP1-5H105.2
Hordeum-OPA-2009-5H160.74
Hordeum-PilotOPA1-5H99.5
Hordeum-QTLConsensus-Abiotic-5H89.64
Hordeum-QTLConsensus-Agronomic-5H89.64
Hordeum-StMo-SNP-5H92.02
Hordeum-SxM-FeedQTL-5H105.2
Hv-Consensus2006-Marcel-5H90.57
Hv-Integrated2009-5H91.6
[ Show Nearby Loci ]
QTL with Locus Marker
QAa.StMo-5H
QAa.StMo-5H.1
Map Data
Barley consensus
[ Show all 15 ]
Species
Hordeum vulgare
Probe
ABG473
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
ABG473-5H
[ Show all 8 ]
Probe
ABG473
Locus
ABG473
[ Show all 9 ]
Remarks
Shin Ebisu16 gDNA
Type
Genomic
PCR
Sequence
BH854360
ABG473
ABG0473-5
Linkage Group
Group 7
Source Species
Hordeum vulgare
Insert Size
0.4