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GrainGenes Marker Report: ABG474

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Locus	ABG474
Type	RFLP STS
Synonym	Synonym ABG474
Chromosome	6H
Chromosome Arm	6HS
Map	Barley-Consensus-6H -0.6 [ Show all 18 ]
	[ Show Nearby Loci ]
Map Data	[ Hide all but 1 of 18 ] Barley consensus Barley consensus 2 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, OPA 2009, Consensus Barley, OWB, 2004 Barley, OWB, 2005 Barley, OWB, OPA2008 Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, SxM Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	ABG474
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	ABG474-6H Xabg474-6A
Probe	ABG474
Locus	ABG474 Xabg474-6A ABG474-6H
Synonym	Synonym HAR35_46399
External Databases	DDBJ EMBL GenBank
Remarks	Shin Ebisu16 gDNA
Type	Genomic STS
PCR primers	TGT CAC TAG CCT TCA GAA CC ATA TGC CTG GAC GAA AAT CT
Sequence	L44031 ABG474 ABG474-5 ABG474-3
Linkage Group	Group 6
Source Species	Hordeum vulgare
Insert Size	1.5