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GrainGenes Marker Report: Amy2A

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Locus	amy2a
Type	RFLP STS
Map	Oat-OxT-32 19.3 Rice-CU-6 121.9
	[ Show Nearby Loci ]
Map Data	Oat, OxT  Mapped_with_probe  Amy2A Rice, BxOl
Probe	Amy2A
Associated Gene	alpha-Amy2A (Avena)
Gene Class	alpha-Amylase
Possible Orthologs	[ Hide all but 1 of 9 ] alpha-Amy-2-7A alpha-Amy-2-7B alpha-Amy-2-7D alpha-Amy-B2 alpha-Amy-D2 Amy2 Xpsr3(alpha-Amy-2)-7A Xpsr3(alpha-Amy-2)-7B Xpsr3(alpha-Amy-2)-7D
Gene Associated with Locus	alpha-Amy2A (Avena)
Gene Class	alpha-Amylase
Locus	amy2a
Clone	Amy2A
Sequence	AJ010728
Probe	Amy2A
Locus	amy2a
Reference	Portyanko VA et al. (2001) A linkage map of hexaploid oat based on grass anchor DNA clones and its relationship to other oat maps Genome 44:249-265.
Remarks	Primer pair amplifies an intron in alpha-Amy2A
Type	PCR STS
PCR primers	5' GCTACGCCTACATCCTCACC 5' CGCGATCTCTTCCTTGAATC
Sequence	AJ010728
Source Gene Class	alpha-Amylase
Source Gene	alpha-Amy2A (Avena)
Source Species	Avena fatua