GrainGenes Marker Report: BCD342
Locus
BCD342
Type
RFLP SNP
Synonym
Synonym POPA2_0882
Chromosome
6A 6B 6D 6H
Chromosome Arm
6AS 6BS 6DS
Map
Barley-consensus-2003-6H 7.2
[ Show all 6 ]
[ Show Nearby Loci ]
Map Data
[ Hide all but 1 of 7 ] Barley consensus 2003 Barley, Consensus 2006, DArT Barley, Consensus 2023, FHB Barley, CxH Barley, CxS Barley, GxH Wheat chromosome arm map
Probe
BCD342
Homology
AAA96773.1 e-value: 0.20 (U51461) IgG anti-nucleosome heavy chain variable region [Mus musculus] BAA90635.1 e-value: 2e-21 (AP001129) EST D23066(C2127) corresponds to a region of the predicted gene.; hypothetical protein [Oryza sativa]
Reference
Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Data Source
Langridge, Peter J.
Remark
Number of populations contributing to the placement of BCD342 in the Barley, Consensus 2006 DArT maps = 1 The RFLP marker was advanced to the POPA2 SNP collection.
Possible Orthologs
bcd342a
[ Show all 16 ]
Probe
BCD342
Locus
Xbcd342-6D
[ Show all 21 ]
Synonym
Synonym HAR35_2877
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Lambda ZAP II library Bar.LambZAPII [c] Bar.LambZAPII
Type
cDNA
Sequence
BE438801
[ Show all 6 ]
Polymorphism
BCD342 EcoRI Durums BCD342 EcoRI
Linkage Group
6S
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
1.2
PCR size
1.2
GrainGenes Marker Report: BCD342
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