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GrainGenes Marker Report: BCD402B

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Locus	BCD402B
Type	RFLP
Synonym	Synonym BCD402
Chromosome	2H 4H
Map	[ Hide all but 1 of 18 ] Barley-consensus-2003-2H 55.2 Barley-Consensus2-4H 32.4 Hordeum-Bins-4H 29.4 Hordeum-Consensus2005-SNP-4H 30.615 Hordeum-Consensus2006-DArT-4H 43.1 Hordeum-Consensus2007-SSR-4H 35.77 Hordeum-NABGMP1-4H 33.7 Hordeum-OPA-2009-4H 38.41 Hordeum-PilotOPA1-4H 30.3 Hordeum-QTLConsensus-Abiotic-4H 30.61 Hordeum-QTLConsensus-Agronomic-4H 30.61 Hordeum-StMo-SNP-4H 31.6 Hordeum-SxM-base-4H 34.5 Hordeum-SxM-FeedQTL-4H 33.7 Hordeum-SxM-SSAP-4H 32.6 Hordeum-SxM-SSR-4H 37.6 Hv-Consensus2006-Marcel-4H 35.77 Hv-Integrated2009-4H 45.6
	[ Show Nearby Loci ]
QTL with Locus Marker	QAa.StMo-4H.1 QDrm.StMo-4H QHd.StMo-4H.1 QMe.StMo-4H
Map Data	Barley consensus 2 [ Show all 18 ]
Species	Hordeum vulgare
Probe	BCD402
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 6 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J. Langridge, Peter J.
Remark	Number of populations contributing to the placement of BCD402B in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	BCD402 [ Show all 16 ]
Probe for Locus	BCD402
Locus	BCD402 [ Show all 17 ]
Synonym	Synonym HAR35_47809 HAR35_7272 HAR35_7906
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Lambda ZAP II library Additional faint insert band of PCR_size 1.6. Bar.LambZAPII [c] Bar.LambZAPII
Type	cDNA
Sequence	L44099 BCD402
Polymorphism	BCD402 EcoRI
Linkage Group	[b 4L]
Insert Enzyme	EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
Insert Size	3.1
PCR size	3.1