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GrainGenes Marker Report: BCD402B

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Locus	BCD402B
Type	RFLP
Synonym	Synonym BCD402
Chromosome	2H 4H
Map	Barley-consensus-2003-2H 55.2 [ Show all 18 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QAa.StMo-4H.1 QDrm.StMo-4H QHd.StMo-4H.1 QMe.StMo-4H
Map Data	[ Hide all but 1 of 18 ] Barley consensus 2 Barley consensus 2003 Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Integrated, Marcel 2009 Barley, OPA 2009, Consensus Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, Steptoe x Morex, SSR Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	BCD402
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 6 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J. Langridge, Peter J.
Remark	Number of populations contributing to the placement of BCD402B in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	BCD402 [ Show all 16 ]
Probe for Locus	BCD402
Locus	BCD402 [ Show all 17 ]
Synonym	Synonym HAR35_47809 HAR35_7272 HAR35_7906
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Lambda ZAP II library Additional faint insert band of PCR_size 1.6. Bar.LambZAPII [c] Bar.LambZAPII
Type	cDNA
Sequence	L44099 BCD402
Polymorphism	BCD402 EcoRI
Linkage Group	[b 4L]
Insert Enzyme	EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
Insert Size	3.1
PCR size	3.1