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GrainGenes Marker Report: Blp (Hordeum)

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Gene	Blp (Hordeum)
Full Name	Black lemma and pericarp
Synonym	Synonym B von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Gene Class	Black lemma and pericarp
Allele	Blp (Hordeum) blp (Hordeum)
Locus	ABC261 Blp mB
Chromosome	1H
Image	Barley, Blp (black head) phenotype.1 Barley, Blp (black head) phenotype.2 Barley, blp (non-black head) phenotype
Data Source	Franckowiak, Jerome D. 96.10
Locus Associated with Gene	Blp
Type	Gene
Chromosome	1H 5 (1H)
Map	[ Hide all but 1 of 7 ] Hordeum-Bins-1H 133 Hordeum-Genes2-1H -57 Hordeum-OWB-1H 109.8 Hordeum-OWB-2004-1H 114.3 Hordeum-OWB-2005-1H 110.8 Hordeum-OWB-SNP-1H 111.77 Hordeum-TxE-1H 228.6
	[ Show Nearby Loci ]
Map Data	Barley genes 2 [ Show all 7 ]
Species	Hordeum vulgare
Associated Gene	Blp (Hordeum)
Gene Class	Black lemma and pericarp
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Kleinhofs, Andris
Remark	This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Locus Associated with Gene	ABC261
Type	RFLP STS
Synonym	Synonym Blp (Hordeum)
Chromosome	1H
Chromosome Arm	1HL
Map	[ Hide all but 1 of 27 ] Barley-Consensus-1H 100.5 Barley-Consensus2-1H 138.6 Barley-ConsensusFHB-1H 137.9 Hordeum-AxK-1H 133.8 Hordeum-Bins-1H 145 Hordeum-Consensus2005-SNP-1H 136.854 Hordeum-Consensus2006-DArT-1H 134 Hordeum-Consensus2007-SSR-1H 125.88 Hordeum-Genes-1H -50.1 Hordeum-HxT-base-1H 143.7 Hordeum-NABGMP1-1H 137.9 Hordeum-NABGMP2-1H 138.5 Hordeum-OPA-2009-1H 186.13 Hordeum-OWB-1H 120.8 Hordeum-OWB-2004-1H 122.2 Hordeum-OWB-2005-1H 119.2 Hordeum-OWB-OPA2008-1H 142.047 Hordeum-OWB-SNP-1H 118.82 Hordeum-PilotOPA1-1H 129.036 Hordeum-QTLConsensus-Abiotic-1H 136.85 Hordeum-QTLConsensus-Agronomic-1H 136.85 Hordeum-StMo-SNP-1H 145.5 Hordeum-SxM-base-1H 139.1 Hordeum-SxM-FeedQTL-1H 137.9 Hordeum-SxM-SSAP-1H 132.6 Hv-Consensus2006-Marcel-1H 125.88 Hv-Integrated2009-1H 127.8
	[ Show Nearby Loci ]
In QTL	QSsg.HaTR-1H
Map Data	Barley consensus [ Show all 27 ]
Species	Hordeum vulgare
Probe	ABC261
Associated Gene	Blp (Hordeum)
Gene Class	Black lemma and pericarp
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. [ Show all 7 ]
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of ABC261 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	Xabc261
Locus Associated with Gene	mB
Type	Gene
Chromosome	1H
Map	Hordeum-LxV-1H 122.6 Hv-Consensus2006-Marcel-1H 116.99 Hv-Integrated2009-1H 119.2 Hv-L94/Vada-2006-1H 126.39
	[ Show Nearby Loci ]
Map Data	Barley, Consensus 2006, Marcel Barley, Integrated, Marcel 2009 Barley, L94 x Vada, 2006  Mapped_by_function  B (Hordeum) Barley, LxV  Mapped_by_function  Blp (Hordeum)
Species	Hordeum vulgare
Probe	Mapped_by_function
Associated Gene	Blp (Hordeum)
Gene Class	Black lemma and pericarp
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = L94 x Vada Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec
Locus	Blp (Hordeum)
Synonym	Synonym ABC261

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