GrainGenes Marker Report: Bmag0867
Locus
Bmag0867
Type
Microsatellite
Chromosome
6H
Map
Barley, B73xCPI-6H 47.8 Barley-ConsensusFHB-6H 60.72 Hordeum-Consensus2007-SSR-6H 63.49 Hv-Integrated2009-6H 64.3
[ Show Nearby Loci ]
Map Data
Barley, B73xCPI Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009
Species
Hordeum vulgare
Probe
Bmag0867 Bmag867
Reference
Remark
[ Hide all but 1 of 6 ] Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Steptoe x Morex Insert contains repeat (TC)20 Polymorphic Information Content (PIC) = 0.53 Developing laboratory = SCRI (R. Waugh)
Possible Orthologs
Bmag867
Probe for Locus
Bmag867
Locus
Bmag0867 Bmag867
Synonym
See also Bmag0867
Reference
Ramsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
General Remarks
Insert contains repeat (TC)20 Quality = 2: Single product, relatively strong stutter bands Diversity Index (DI) = 0.53
Type
PCR SSR
PCR primers
5' CCCCACACTGACCTACAG 3'
5' TTACATCTGCTAGATCGAAGC 3'
SSR size
131
Amplification Conditions
3 min 94C, 45 cycles of 1 min @94C, 1 min @55C, 2 min @72C, final extension of 10 min @72C. 25 microlitre reactions contained 125 nM of each primer.
Source Species
Hordeum vulgare
GrainGenes Marker Report: Bmag0867
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