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GrainGenes Marker Report: CDO020

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Locus	CDO020
Type	RFLP
Chromosome	4H
Map	Barley-ConsensusFHB-4H 111.8 Hordeum-Bins-4H 99 Hordeum-FxS-FHB-QTL-4H 204.6
	[ Show Nearby Loci ]
Map Data	Barley, BinMap 2005 Barley, Consensus 2023, FHB Barley, FxS, FHB QTL
Probe	CDO20
Homology	AC051633_5 e-value: 1e-25 (AC051633) putative ubiquitin protein [Oryza sativa] AC051633_5 e-value: 4e-14 (AC051633) putative ubiquitin protein [Oryza sativa]
Reference	Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source	Kleinhofs, Andris
Remark	This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Possible Orthologs	[ Hide all but 1 of 11 ] cdo20 CDO20a Xcdo20 Xcdo20-4B Xcdo20-5A Xcdo20.1 Xcdo20a Xcdo20b CDO20 cdo20-4B cdo20-5A
Probe for Locus	CDO20
Locus	Xcdo20-5A [ Show all 12 ]
Synonym	Synonym HAR35_17893 HAR35_1872
Related Probe	CDO394 CDO1528
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library
Type	cDNA
Sequence	BE439040 [ Show all 6 ]
Polymorphism	CDO20 DraI CDO20 EcoRV CDO20 EcoRI CDO20 HindIII CDO20 XbaI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
PCR size	1.2