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GrainGenes Marker Report: CDO057A

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Locus	CDO057A
Type	RFLP
Chromosome	2H
Map	Hordeum-Bins-2H 6 Hordeum-FxS-FHB-QTL-2H 9.6
	[ Show Nearby Loci ]
Map Data	Barley, BinMap 2005 Barley, FxS, FHB QTL
Probe	CDO57
Reference	Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source	Kleinhofs, Andris
Remark	This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Possible Orthologs	CDO057 [ Show all 29 ]
Probe for Locus	CDO57
Locus	[ Hide all but 1 of 33 ] Xcdo57-2 CDO57 Xcdo57-2A Xcdo57-5D Xcdo57D Xcdo57A cdo57a cdo57b cdo57d Xcdo57-5A Xcdo57 Xcnl.CDO57 HD089K23 HD052B3 D1.1_ctg605 Xcdo57B Xcdo57C Xcdo57-7A CDO057A CDO057B Xcdo57.3 cdo57c CDO057 CDO057b-5H CDO57(A) CDO57(B) cdo57 CDO57A CDO57B CDO57C CDO57D cdo57-5A cdo57-5B
Related Probe	BCD981 [ Show all 6 ]
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BQ548073 BQ548072 CDO57-5 CDO57-3
Polymorphism	CDO57 EcoRV CDO57 EcoRI CDO57 XbaI
Linkage Group	7L,5L [b 2S]
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.6
PCR size	1.6