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GrainGenes Marker Report: CDO1380

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Locus	cdo1380
Type	RFLP
Synonym	Synonym CDO1380a CDO1380b
Chromosome	6A 6B 6D
Chromosome Arm	6AL 6BL 6DL
Map	Oat-2003-OglexMAM17-5_3 39 Oat-2004-OxM-QTL4_3 45.6 Oat-KxO/2003-36 0 RGA-2013_KO36 0 Rice-CU-2 81.1
	[ Show Nearby Loci ]
Map Data	Oat, KxO, 2003 [ Show all 7 ]
Probe	CDO1380
Homology	CAC05452.1 e-value: 1e-17 (AL391712) putative protein [Arabidopsis thaliana]
Remark	Marker placement value = 0.00 cM on map Oat-KxO/2003-36 Marker is a framework marker on map Oat-KxO/2003-36
Possible Orthologs	CDO1380a [ Show all 8 ]
Probe	CDO1380
Locus	[ Hide all but 1 of 20 ] CDO1380a Xcdo1380-6B Xcdo1380 cdo1380 HD012P2 HD012P3 HD012P4 HD012P6 HD012P7 HD012P8 HD012H3 CDO1380b CDO1380c CD1380A CD1380B CD1380C CD1380D CDO1380 CDO1380A CDO1380B
Synonym	Other name CD1380 Synonym HAR35_17894
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439201 CDO1380_WHE03D03.r1 AA231833 AA231886
Polymorphism	CDO1380 EcoRI CDO1380 DraI
Linkage Group	6L
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.2
PCR size	1.2