GrainGenes Marker Report: CDO405
Locus
CDO405
Type
RFLP
Synonym
Other name cdo405
Chromosome
2A 2B 2D
Chromosome Arm
2BS 2DS
Map
Oat-2001-KxO_8 8.75
[ Show all 7 ]
[ Show Nearby Loci ]
Map Data
[ Hide all but 1 of 8 ] Maize, TxCM Oat, KxO, 2003 Oat-2001-KxO Oat-2009-KxO Oat-2016-Consensus Oat-2018-Consensus Rice, BxOl Wheat chromosome arm map
Species
Avena sativa
Probe
CDO405
Homology
CAB81517.1 e-value: 7e-10 (AL161588) ATM-like protein [Arabidopsis thaliana]
Remark
Marker placement value = 28.90 cM on map Oat-KxO/2003-8 Marker is not a framework marker on map Oat-KxO/2003-8
Possible Orthologs
cdo405a
[ Show all 16 ]
Probe
CDO405
Locus
CDO405
[ Show all 18 ]
Synonym
Synonym HAR35_3670
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks
Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type
cDNA
Sequence
BE439061
[ Show all 6 ]
Polymorphism
CDO405 EcoRI Durums CDO405 EcoRI CDO405 EcoRV
Linkage Group
2S
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.8
PCR size
1.8
GrainGenes Marker Report: CDO405
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