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GrainGenes Marker Report: CDO473

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Locus	CDO473
Type	RFLP
Chromosome	1A 1B 1D 1H
Chromosome Arm	1AL 1BL 1DL
Map	1D.1R recombinants -39.3 Barley-consensus-2003-1H 29.1 Hordeum-Bins-1H 57 Hordeum-Consensus2006-DArT-1H 72.9 Hordeum-CxS-1H 169.8
	[ Show Nearby Loci ]
Rearrangement	In segment RL-1 Not in segment 82-180 WR-4 WR-5 R1
Map Data	[ Hide all but 1 of 7 ] Barley consensus 2003 Barley, BinMap 2005 Barley, Consensus 2006, DArT Barley, CxS Wheat chromosome arm map Wheat sprouting markers Wheat.Rye recombinant
Probe	CDO473
Homology	AF216852_1 e-value: 2e-46 (AF216852) delta-COP [Zea mays] AF216852_1 e-value: 7e-81 (AF216852) delta-COP [Zea mays]
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Data Source	Kleinhofs, Andris Langridge, Peter J.
Remark	Number of populations contributing to the placement of CDO473 in the Barley, Consensus 2006 DArT maps = 1 This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Possible Orthologs	CDO473B Xcdo473 Xcdo473-1A cdo473 cdo473-1A
Probe	CDO473
Locus	CDO473 [ Show all 6 ]
Synonym	Synonym HAR35_1297 HAR35_8882
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439063 BE439114 CDO473_WHE2G0051 CDO473_WHE2G0052
Polymorphism	Durums CDO473 EcoRI CDO473 XbaI
Linkage Group	1L, 4L
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.8
PCR size	1.8