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GrainGenes Marker Report: CDO545

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Locus	CDO545
Type	RFLP
Synonym	Other name cdo545
Chromosome	7H
Chromosome Arm	7HS
Map	Barley-Consensus-7H -59.3 [ Show all 8 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 9 ]
Species	Avena sativa Avena sativa L.
Probe	CDO545
Homology	AC016163_11 e-value: 3.7 (AC016163) hypothetical protein; 82480-83859 [Arabidopsis thaliana] AC016163_11 e-value: 4.6 (AC016163) hypothetical protein; 82480-83859 [Arabidopsis thaliana]
Data Source	Kleinhofs, Andris
Remark	This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Marker placement value = 3.23 cM on map Oat-KxO/2003-17 Marker is not a framework marker on map Oat-KxO/2003-17
Possible Orthologs	cdo545a [ Show all 12 ]
Probe	CDO545
Locus	Xcdo545 [ Show all 13 ]
Synonym	Synonym HAR35_1176 HAR35_28688
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
Remarks	Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type	cDNA
Sequence	[ Hide all but 1 of 8 ] BE439189 BE439151 BE439219 CDO545_WHE03A01.r1 CDO545_WHE03B08.s1 CDO545_WHE03B08.r1 AA231713 AA231869
Polymorphism	CDO545 EcoRI CDO545 DraI CDO545 HindIII
Linkage Group	[b 1S]
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	2.5
PCR size	2.5