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GrainGenes Marker Report: D1.1_ctg9337

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Locus	D1.1_ctg9337
Type	BAC_contig
Map	Ta-Physical-Gill-4D 4.94 Ta-Synthetic/Opata-BARC-4D 64.4 Ta-Synthetic/Opata-DR-4D 26.1 Wheat, Yr genes and QTL 4D 57.5 Wheat_Yr_2021-4D 97.93
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Map Data	Wheat, Yr genes and QTL Wheat, Yr Update, 2021
Probe	CDO1312
Homology	AF295664_1 e-value: 9e-05 (AF295664) CBL-interacting protein kinase 9 [Arabidopsis thaliana] AF339147_1 e-value: 4e-33 (AF339147) SOS2-like protein kinase PKS5 [Arabidopsis thaliana]
Probe for Locus	CDO1312
Locus	[ Hide all but 1 of 33 ] Xcdo1312-4B Xcdo1312-4D Xcdo1312-5A Xcdo1312-4B.3 Xcdo1312-4B.1 Xcdo1312-4B.2 Xcdo1312-1B Xcdo1312 RI038H2 D1.1_ctg9337 D1.1_ctg9337_1 D1.1_ctg9337_2 CDO1312 CDO1312B CDO1312C CDO1312D Xcdo1312.1 Xcdo1312a Xcdo1312b Xcdo1312c cdo1312a Xcdo1312-1B.1 Xcdo1312-1B.2 cdo1312 CDO1312A cdo1312-4B cdo1312-4D cdo1312-5A cdo1312b XcnlCDO1312-1B XcnlCDO1312-4B XcnlCDO1312-4D XcnlCDO1312-5A
Synonym	Synonym HAR35_1447 HAR35_1448
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439333 BE439364 CDO1312_WHE05E12.s1
Polymorphism	CDO1312 XbaI
Linkage Group	1BL4BL4DL5AL
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.4
PCR size	1.4