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GrainGenes Marker Report: E45M55-400

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Locus
E45M55-400
Type
AFLP
Chromosome
5H
Map
[ Hide all but 1 of 7 ]
Barley-ConsensusFHB-5H40.63
Hordeum-Consensus2007-SSR-5H25.57
Hordeum-LxV-5H22.3
Hv-Consensus2006-Marcel-5H25.57
Hv-Integrated2009-5H27.9
Hv-L94/Vada-2006-5H25.7
Hv-Vada/SusPtrit-5H19.97
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Map Data
Barley, Consensus 2006, Marcel
[ Show all 7 ]
Species
Hordeum vulgare
Probe
E45/M55
Image
Barley AFLP E45/M55 autoradiogram
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = L94 x Vada, Vada x SusPtrit
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec; Vada x SusPtrit
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'



Probe for Locus
E45/M55
Locus
E45M55-317
[ Show all 51 ]
Type
PCR
AFLP
AFLP primers
E45 5'GACTGCGTACCAATTCATG
M55 5'GATGAGTCCTGAGTAACGA
Polymorphism
E45/M55