GrainGenes Marker Report: EBmac0755
Locus
EBmac0755
Type
Microsatellite
Chromosome
7H
Map
Barley, B73xCPI-7H 155.9
[ Show all 7 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QHea.pil-7H.4 QHei.pil-7H.6 QYld.pil-7H.3
Map Data
[ Hide all but 1 of 7 ] Barley, AxHs/QTL Barley, B73xCPI Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, LxHs
Species
Hordeum vulgare
Probe
EBmac0755 EBmac755
Reference
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
[ Show all 7 ]
Possible Orthologs
EBmac755
Probe for Locus
EBmac755
Locus
EBmac0755 EBmac755
Synonym
Other name EBmac0755
Reference
Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Ramsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
General Remarks
Insert contains repeat (AC)16 Quality = 2: Single product, relatively strong stutter bands Diversity Index (DI) = 0.72
Type
PCR SSR
PCR primers
5' AGCCTTGTGTATCAGGACA 3'
5' CTGCTGGTGTTCTCTAAAAGT 3' AGCCTTGTGTATCAGGACA
CTGCTGGTGTTCTCTAAAAGT
SSR size
143
Amplification Conditions
1 cycle of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 30 cycles of 1 min @ 94C, 1 min @ 55C, 1 min @ 72C, 1 cycle of 5 mins @ 72C.
Source Species
Hordeum vulgare
GrainGenes Marker Report: EBmac0755
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