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GrainGenes Marker Report: GBMS216

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Locus	GBMS216
Type	Microsatellite
Chromosome	2H
Map	Barley-ConsensusFHB-2H 153.51 [ Show all 6 ]
	[ Show Nearby Loci ]
Map Data	Barley, Consensus 2006, Marcel [ Show all 7 ]
Species	Hordeum vulgare
Probe	GBMS0216 GBMS216
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Remark	[ Hide all but 1 of 9 ] Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = L94 x Vada, Vada x SusPtrit, Igri x Franka Polymorphic Information Content (PIC) = 0.77 Number of alleles = 5 Map position not determined on Vada x SusPtrit map Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : L94 x Vada; Oregon Wolfe Dom x Rec; Vada x SusPtrit; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : L94 x Vada, SusPtrit x Vada, Igri x Franka Insert contains repeat (GA)33 Developing laboratory = IPK (M Roeder, M. Ganal)
Probe for Locus	GBMS0216
Locus	GBMS216
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
General Remarks	Primer sequences for this SSR are proprietary, those interested should contact Marion Roeder
Type	SSR