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GrainGenes Marker Report: GBMS223b

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Locus	GBMS223b
Type	Microsatellite
Chromosome	3H
Map	Barley-ConsensusFHB-3H 57.19 Hordeum-Consensus2007-SSR-3H 50.57 Hordeum-SxM-SSR-3H 83.3 Hv-Consensus2006-Marcel-3H 50.57 Hv-Integrated2009-3H 63.9
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Map Data	Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, Steptoe x Morex, SSR
Species	Hordeum vulgare
Probe	GBMS223
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Remark	[ Hide all but 1 of 9 ] Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Polymorphic Information Content (PIC) = 0.91 Number of alleles = 4 Marker location as determined on wheat-barley chromosome addition lines = 3H Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Steptoe x Morex Insert contains repeat (GT)14 Developing laboratory = IPK (M Roeder, M. Ganal)
Probe for Locus	GBMS223
Locus	GBMS223b
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
General Remarks	Insert contains repeat (CA)10 Primer sequences for this SSR are proprietary. Those interested should contact Marion Roeder. Primer sequences for this SSR are proprietary, those interested should contact Marion Roeder
Type	PCR SSR
Source Species	Hordeum vulgare
Source Germplasm	Franka (barley)