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GrainGenes Marker Report: Glb1 (Hordeum)

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Gene	Glb1 (Hordeum)
Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Locus	Glb1
Candidate Locus	Glb1
Reference	MacLeod LC et al. (1991) Chromosomal mapping of the Glb 1 locus encoding 1-3 1-4-beta-d glucan 4-glucanohydrolase EI in barley. Journal of Cereal Science 13:291-298. Slakeski N et al. (1990) Structure and tissue-specific regulation of genes encoding barley 1- 3 1-4-beta glucan endohydrolases. Molecular and General Genetics 224:437-449.
Chromosome	1H
Clone	lambda_HV29
Info Source	von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Locus Associated with Gene	Glb1
Type	Gene RFLP
Synonym	Synonym Glb1 (Hordeum)
Chromosome	1H
Chromosome Arm	1HL
Map	[ Hide all but 1 of 19 ] Barley-Consensus-1H 19.9 Barley-Consensus2-1H 80.5 Barley-ConsensusFHB-1H 70 Hordeum-Bins-1H 79.2 Hordeum-Consensus2005-SNP-1H 75.612 Hordeum-Consensus2006-DArT-1H 68.6 Hordeum-Consensus2007-SSR-1H 68.07 Hordeum-Genes-1H 9.7 Hordeum-NABGMP1-1H 72.4 Hordeum-OPA-2009-1H 90.92 Hordeum-PilotOPA1-1H 68.662 Hordeum-QTLConsensus-Abiotic-1H 75.61 Hordeum-QTLConsensus-Agronomic-1H 75.61 Hordeum-StMo-SNP-1H 82.75 Hordeum-SxM-base-1H 72.2 Hordeum-SxM-FeedQTL-1H 72.4 Hordeum-SxM-SSAP-1H 66.2 Hv-Consensus2006-Marcel-1H 68.07 Hv-Integrated2009-1H 68.1
	[ Show Nearby Loci ]
In QTL	QBgn.StMo-1H QBgsg.StMo-1H QBgsg.StMo-1H.1
Map Data	Barley consensus [ Show all 19 ]
Species	Hordeum vulgare
Probe	pHGHN29A
Associated Gene	Glb1 (Hordeum)
Candidate Gene	Glb1 (Hordeum)
Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of Glb1 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	XGlb1
Locus Candidate for Gene	Glb1
Type	Gene RFLP
Synonym	Synonym Glb1 (Hordeum)
Chromosome	1H
Chromosome Arm	1HL
Map	[ Hide all but 1 of 19 ] Barley-Consensus-1H 19.9 Barley-Consensus2-1H 80.5 Barley-ConsensusFHB-1H 70 Hordeum-Bins-1H 79.2 Hordeum-Consensus2005-SNP-1H 75.612 Hordeum-Consensus2006-DArT-1H 68.6 Hordeum-Consensus2007-SSR-1H 68.07 Hordeum-Genes-1H 9.7 Hordeum-NABGMP1-1H 72.4 Hordeum-OPA-2009-1H 90.92 Hordeum-PilotOPA1-1H 68.662 Hordeum-QTLConsensus-Abiotic-1H 75.61 Hordeum-QTLConsensus-Agronomic-1H 75.61 Hordeum-StMo-SNP-1H 82.75 Hordeum-SxM-base-1H 72.2 Hordeum-SxM-FeedQTL-1H 72.4 Hordeum-SxM-SSAP-1H 66.2 Hv-Consensus2006-Marcel-1H 68.07 Hv-Integrated2009-1H 68.1
	[ Show Nearby Loci ]
In QTL	QBgn.StMo-1H QBgsg.StMo-1H QBgsg.StMo-1H.1
Map Data	Barley consensus [ Show all 19 ]
Species	Hordeum vulgare
Probe	pHGHN29A
Associated Gene	Glb1 (Hordeum)
Candidate Gene	Glb1 (Hordeum)
Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of Glb1 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	XGlb1
Locus	Glb1 (Hordeum)
Synonym	Synonym Glb1

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