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GrainGenes Marker Report: Glb1 (Hordeum)

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Gene	Glb1 (Hordeum)
Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Locus	Glb1
Candidate Locus	Glb1
Reference	MacLeod LC et al. (1991) Chromosomal mapping of the Glb 1 locus encoding 1-3 1-4-beta-d glucan 4-glucanohydrolase EI in barley. Journal of Cereal Science 13:291-298. Slakeski N et al. (1990) Structure and tissue-specific regulation of genes encoding barley 1- 3 1-4-beta glucan endohydrolases. Molecular and General Genetics 224:437-449.
Chromosome	1H
Clone	lambda_HV29
Info Source	von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Locus Associated with Gene	Glb1
Type	Gene RFLP
Synonym	Synonym Glb1 (Hordeum)
Chromosome	1H
Chromosome Arm	1HL
Map	Barley-Consensus-1H 19.9 [ Show all 19 ]
	[ Show Nearby Loci ]
In QTL	QBgn.StMo-1H QBgsg.StMo-1H QBgsg.StMo-1H.1
Map Data	[ Hide all but 1 of 19 ] Barley consensus Barley consensus 2 Barley genes Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, OPA 2009, Consensus Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	pHGHN29A
Associated Gene	Glb1 (Hordeum)
Candidate Gene	Glb1 (Hordeum)
Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of Glb1 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	XGlb1
Locus Candidate for Gene	Glb1
Type	Gene RFLP
Synonym	Synonym Glb1 (Hordeum)
Chromosome	1H
Chromosome Arm	1HL
Map	Barley-Consensus-1H 19.9 [ Show all 19 ]
	[ Show Nearby Loci ]
In QTL	QBgn.StMo-1H QBgsg.StMo-1H QBgsg.StMo-1H.1
Map Data	[ Hide all but 1 of 19 ] Barley consensus Barley consensus 2 Barley genes Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, BinMap 2005 Barley, Consensus 2005, SNP Barley, Consensus 2006, DArT Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, OPA 2009, Consensus Barley, Pilot OPA1, Consensus Barley, Steptoe x Morex, SNP Barley, Steptoe x Morex, SSAP Barley, SxM Barley, SxM basemap Barley, SxM, Feed QTLs
Species	Hordeum vulgare
Probe	pHGHN29A
Associated Gene	Glb1 (Hordeum)
Candidate Gene	Glb1 (Hordeum)
Gene Class	(1->3,1->4)-beta-glucan 4-glucanohydrolase
Reference	Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of Glb1 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	XGlb1
Locus	Glb1 (Hordeum)
Synonym	Synonym Glb1

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