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GrainGenes Marker Report: Glu-D1 (Triticum)

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Gene	Glu-D1 (Triticum)
Synonym	Other name Glt-D1 Galili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86. Glt-D2 Galili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86. Glu 1D Sozinov Aa (1984) Blocks of cereal storage proteins as genetic markers. Proceedings of the 2nd International Workshop on Gluten Proteins, Wageningen, The Netherlands 121-127. Synonym Glu-D1
Gene Class	Glutenins
Orthologous Gene Set	Glu-1
Allele	Glu-D1a (Triticum) [ Show all 19 ]
Locus	Glu-1 Glu-D1 GluD-1D GluD1 XGlu1
Candidate Locus	TraesCS1D02G317211.1 XGlu-1 Xpsr12(Glu-1)-1D
Reference	Cheng S et al. (2024) Harnessing Landrace Diversity Empowers Wheat Breeding for Climate Resilience Nature. [ Show all 10 ]
URL	Molecular markers for glutenins at MASWheat Gene record in the Catalog of Gene Symbols for Wheat at Komugi
Chromosome	1D Bietz JA et al. (1975) Cereal single-kernel analysis of glutenin: Use in wheat genetics and breeding. Cereal Chemistry 52:513-532. [ Show all 6 ]
Chromosome Arm	1DL Bietz JA et al. (1975) Cereal single-kernel analysis of glutenin: Use in wheat genetics and breeding. Cereal Chemistry 52:513-532. Brown JWS et al. (1979) Control of endosperm proteins in Triticum aestivum (var. Chinese Spring) and Aegilops umbellulata by homoeologous group 1 chromosomes. Genetics 93:189-200. Lawrence GJ and Shepherd KW (1980) Variation in glutenin protein subunits in wheat. Australian Journal of Biological Sciences 33:221-233. Orth RA and Bushuk W (1974) VI. Chromosomal location of genes coding for subunits of glutenin of common wheat. Cereal Chemistry 51:118-126. Payne PI et al. (1982) Structural and genetical studies on the high-molecular-weight subunits of wheat glutenin III. Telocentric mapping of the subunit genes on the long arms of the homoeologous group 1 chromosomes. Theoretical and Applied Genetics 63:129-138.
Germplasm	Hexaploid stock Chinese Spring
Comment	Glu-D1k (291) appears to have arisen as the result of a deficiency of subunit 12 from Glu-D1a (2+12); subunits 2 and 12 are referred to as D1 and D5 in 291. One of the Glu-D1o subunits has been numbered 13 in 545; 13 was previously used to number a subunit encoded by Glu-B1f (13+16) and Glu-B1g (13+19) (796). Subunit 9 of Glu-D1g (5+9) was so numbered in 327 because its mobility is the same as one of the subunits encoded by Glu-B1c (7+9). Five combinations involving 6 HMW subunits [1D (p-t)] are listed in 290. Eleven additional Glu-D1 alleles in T. tauschii were described (545). See the Catalogue of Gene Symbols for Wheat for a full description of alleles
Clone	GLU Dx GLU Dx5 TraesCS1D02G317211
Sequence	TraesCS1D02G317211.1
Wheat Gene Catalog Reference	327 Gupta RB and Shepherd KW (1988) Inheritance of novel high-molecular-weight glutenin subunits in the Tunisian bread wheat BT-2288. Genome 30:442-445. 545 Lagudah ES and Halloran GM (1988) Phylogenetic relationships of Triticum taushii the D genome donor of hexaploid wheat 1. Variation in HMW subunits of glutenin and gliadins. Theoretical and Applied Genetics 75:592-598. 291 Galili G and Feldman M (1984) A deficiency of the rapidly migrating high molecular weight glutenin subunit D5 in common wheat. Cereal Research Communications 12:259-261. 290 Galili G and Feldman M (1983) Genetic control of endosperm proteins in wheat 2. Variation in high-molecular-weight glutenin and gliadin subunits of Triticum aestivum. Theoretical and Applied Genetics 66:77-86. 796 Payne PI and Lawrence GJ (1983) Catalogue of alleles for the complex gene loci, Glu-A1, Glu-B1, and Glu-D1 which code for high molecular-weight subunits of glutenin in hexaploid wheat. Cereal Research Communications 11:29-35.
Info Source	McIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Data Curator	Hart, Gary E. 95.08.24
Locus Associated with Gene	Glu-1
Type	Gene
Chromosome	1A 1B 1D 1R
Chromosome Arm	1AL 1BL 1DL 1RL
Map	Secale-Devos-1R 3.1 Secale-DxR-RAPD-1R 78.2 Ta-Gale-1A 25.6 Ta-Gale-1B 25.6 Ta-Gale-1D 25.6
	[ Show Nearby Loci ]
Map Data	Rye, Ds2 x RxL10 Rye, Ds2 x RxL10, RAPD Wheat, Gale
Associated Gene	Glu-A1 (Triticum) Glu-B1 (Triticum) Glu-D1 (Triticum) Glu-R1 (Secale)
Gene Class	Glutenins
Possible Orthologs	Glu-A1 [ Show all 17 ]
Locus Associated with Gene	Glu-D1
Type	Gene
Synonym	Other name Glu-1D
Chromosome	1D
Chromosome Arm	1DL
Map	Ta-Synthetic/Opata-1D 74 [ Show all 8 ]
	[ Show Nearby Loci ]
Map Data	T.tauschii [ Show all 8 ]
2 Point Data	[ Hide all but 1 of 11 ] Centromere/Glu-D1#1 Centromere/Glu-D1#2 Centromere/Glu-D1#3 Centromere/Glu-D1#4 Gli-D1/Glu-D1#1 Gli-D1/Glu-D1#2 Gli-D1/Glu-D1#3 Gli-D1/Glu-D1#4 Gpi-D1/Glu-D1#1 Lr21/Glu-D1#1 Rg2/Glu-D1#1
Probe	GLU D1d Ishikawa G and Nakamura T (2007) A new co-dominant PCR-based marker to identify the high-molecular-weight glutenin subunit combination (5+10) of common wheat. Wheat Information Service 103:1-3. GLU Dx5-2 GLU Dy-10/12 Smith R et al. (1994) Identification of glutenin alleles in wheat and triticale using PCR generated DNA markers Crop Science 34:1373-1378. UMN25 Liu S et al. (2008) New DNA markers for high molecular weight glutenin subunits in wheat. Theoretical and Applied Genetics 118:177-183. UMN26 Liu S et al. (2008) New DNA markers for high molecular weight glutenin subunits in wheat. Theoretical and Applied Genetics 118:177-183.
Associated Gene	Glu-D1 (Triticum)
Gene Class	Glutenins
Reference	Singh NK and Shepherd KW (1988) Linkage mapping of genes controlling endosperm storage proteins in wheat. 2. Genes on the long arm of the group 1 chromosomes. Theoretical and Applied Genetics 75:642-650. Payne PI et al. (1982) Structural and genetical studies on the high-molecular-weight subunits of wheat glutenin III. Telocentric mapping of the subunit genes on the long arms of the homoeologous group 1 chromosomes. Theoretical and Applied Genetics 63:129-138. MAS Wheat. Functional Markers for processing quality genes in wheat MAS Wheat. Marker Assisted Selection in Wheat.
Remark	Ordered at LOD < 3.0 in map 'Wheat, Synthetic x Opata'.
Possible Orthologs	Glu-1 [ Show all 17 ]
Locus Associated with Gene	GluD-1D
Map	CS/SQ1-1D 130.5
	[ Show Nearby Loci ]
Map Data	Wheat, Chinese Spring x SQ1
Associated Gene	Glu-D1 (Triticum)
Gene Class	Glutenins
Locus Associated with Gene	GluD1
Type	Gene
Chromosome	1D
Map	Wheat, Yr genes and QTL 1D 41.7 Wheat_Yr_2021-1D 82.91
	[ Show Nearby Loci ]
Map Data	Wheat, Yr genes and QTL Wheat, Yr Update, 2021
Associated Gene	Glu-D1 (Triticum)
Gene Class	Glutenins
Remark	Curator Note (Jan 2019). There are many forms of Glu-D1 in GrainGenes and this marker is likely in that class. There is a Glu-D1 in the original map set 'Yr Genes and QTL' and this marker maps nearby.
Possible Orthologs	Glu-1 [ Show all 17 ]
Locus Associated with Gene	XGlu1
Type	RFLP
Chromosome	1A
Chromosome Arm	1AL 1L
Map	1AS, T.m. G1777 x G2528 5.4 [ Show all 9 ]
	[ Show Nearby Loci ]
Map Data	1AS, T.m. G1777 x G2528  Mapped_with_probe  pDY10A/KS [ Show all 9 ]
Probe	pDY10A/KS pDY10A/KS-
Associated Gene	Glu-A1 (Triticum) Glu-B1 (Triticum) Glu-D1 (Triticum)
Candidate Gene	Glu-A1 (Triticum)
Gene Class	Glutenins
Locus Candidate for Gene	TraesCS1D02G317211.1
Type	gene
Synonym	Synonym TraesCS1D03G0754500
Chromosome	1D
Species	Triticum aestivum
Probe	TraesCS1D02G317211
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
Locus Candidate for Gene	XGlu-1
Type	RFLP
Map	Tt-Appels-1D 16
	[ Show Nearby Loci ]
Map Data	T.tauschii, Appels
Candidate Gene	Glu-D1 (Triticum)
Possible Orthologs	Glu-1 [ Show all 17 ]
Locus Candidate for Gene	Xpsr12(Glu-1)-1D
Type	RFLP
Synonym	Other name XGlu-D1-1 McIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500. XGlu-D1-2 McIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Chromosome	1D
Chromosome Arm	1DL
Species	Triticum aestivum
Probe	pTag1290 Thompson RD et al. (1983) Characterisation of the multigene family coding for HMW glutenin subunits in wheat using cDNA clones. Theoretical and Applied Genetics 67:87-96.
Candidate Gene	Glu-D1 (Triticum)
Reference	Harberd NP et al. (1986) DNA restriction-fragment variation in the gene family encoding high-molecular-weight (HMW) glutenin subunits of wheat. Biochemical Genetics 24:579-596. Thompson RD et al. (1983) Characterisation of the multigene family coding for HMW glutenin subunits in wheat using cDNA clones. Theoretical and Applied Genetics 67:87-96.
Possible Orthologs	Glu-1 [ Show all 17 ]

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