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GrainGenes Marker Report: HVCSG

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Locus	HVCSG
Type	Microsatellite
Chromosome	2 (2H) 2H
Map	[ Hide all but 1 of 7 ] Barley, B73xCPI-2H 157.3 Barley-consensus-2003-2H 136.6 Hordeum-Bins-2H 146 Hordeum-Consensus2006-DArT-2H 146 Hordeum-Pillen-2H 106 Hordeum-TxE-2H 332.9 Hv-Integrated2009-2H 132.7
	[ Show Nearby Loci ]
Map Data	Barley consensus 2003 [ Show all 7 ]
Probe	HVCSG
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Data Source	Kleinhofs, Andris Langridge, Peter J.
Remark	Number of populations contributing to the placement of HvCSG in the Barley, Consensus 2006 DArT maps = 1 This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Nure x Tremois
Probe	HVCSG
Locus	HVCSG
Reference	Hearnden PR et al. (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theoretical and Applied Genetics 115:383-391. Becker J and Heun M (1995) Barley microsatellites: allele variation and mapping Plant Molecular Biology 27:835-845.
Remarks	PCR size is expected size (kb) based on published sequence. Insert contains repeats (GT)4 and (G)17.
Type	PCR SSR
PCR primers	5' CACTTGCCTACCTCGATATAGTTTGC 3' 5' GTGGATTCCATGCATGCAATATGTGG 3'
SSR size	0.196
Sequence	X58339
Source Gene Class	Chalcone synthase
Source Species	Hordeum vulgare