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GrainGenes Marker Report: HVPRP

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Locus
HVPRP
Type
Microsatellite
Chromosome
7H
Map
[ Hide all but 1 of 6 ]
Barley-ConsensusFHB-7H156.6
Hordeum-Consensus2005-SNP-7H148.5
Hordeum-Consensus2007-SSR-7H148.95
Hordeum-LiHs-SNP-7H192.59
Hordeum-QTLConsensus-Abiotic-7H148.5
Hordeum-QTLConsensus-Agronomic-7H148.5
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Map Data
Barley, Abiotic QTL Consensus
[ Show all 6 ]
Species
Hordeum spontaneum
Hordeum vulgare
Probe
HVPRP
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceBecker J and Heun M (1995) Barley microsatellites: allele variation and mapping Plant Molecular Biology 27:835-845.
Remark
Locus in 'Barley, Consensus 2007, SSR' mapped in population(s) : Lina x H. spontaneum
Insert contains repeat (GT)6(AT)6
Developing laboratory = MPIZ (M. Heun)



Probe
HVPRP
Locus
HVPRP
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceBecker J and Heun M (1995) Barley microsatellites: allele variation and mapping Plant Molecular Biology 27:835-845.
Type
SSR
PCR primers
ATAACTACCAGATCACCTTCTGCC
GGAACGAAGGGAGTATTAAGCA