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GrainGenes Marker Report: HvKNOX3

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Locus
HvKNOX3
Type
Gene
IFLP
Microsatellite
STS
Synonym
SynonymKap (Hordeum)
Chromosome
4H
4H + 7H
Map
Barley-ConsensusFHB-4H48.01
[ Show all 13 ]
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 13 ]
Species
Hordeum vulgare
Probe
hvKnox 3B/3C
HvKNOX3
Associated Gene
Kap (Hordeum)
Gene Class
Hooded/elevated hooded/awned lemma
Image
PCR of Hvknox3 in the OWBs
Reference
[ Hide all but 1 of 7 ]
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferencePillen K et al. (2000) Mapping new EMBL-derived barley microsatellites and their use in differentiating German barley cultivars Theoretical and Applied Genetics 101:652-660.
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
ReferenceMuller KJ et al. (1995) The barley Hooded mutation caused by a duplication in a homeobox gene intron Nature 374:727-730.
Remark
Assigned to a barley chromosome by PCR screening of wheat barley addition lines
[ Show all 9 ]
Probe for Locus
hvKnox 3B/3C
Locus
HvKNOX3
Reference
ReferenceRamsay L et al. (2000) A simple sequence repeat-based linkage map of barley Genetics 156:1997-2005.
Type
PCR
PCR primers
3B 5' CCCCTCAAAGTTCAGGTCAATCCT
3C 5' ACATCAATCAGAAAAGAAAGCATT