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GrainGenes Marker Report: IWB5747

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Locus	IWB5747
Type	SNP
Synonym	Other name BS00000346 BS00000346_51 Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm	4A
Map	[ Hide all but 1 of 7 ] Wheat, Yr genes and QTL 4A 75.6 Wheat_2014_90KSNP_4A 125.624 Wheat_AB, Colosseo x Lloyd 4A_2 57.2 Wheat_AB, Latino x MG5323 4A 136.6 Wheat_AB, Simeto x Molise Colli 4A 193.1 Wheat_AB_2015_Consensus-4A 154 Wheat_Yr_2021-4A 161.67
	[ Show Nearby Loci ]
Map Data	Wheat, Yr genes and QTL [ Show all 7 ]
Species	Triticum aestivum
Probe	BS00000346_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Probe	BS00000346_51
Locus	IWB5747 BS00000346 BS00000346_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796. Allen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type	SNP KASP
PCR primers	FAM 5' CAGCGCAAGAGGATCCCACG 3' Common 5' AAGAGCGGCAGCTGCAGCGAT 3' VIC 5' CAGCGCAAGAGGATCCCACA 3' Common 5' AAGAGCGGCAGCTGCAGCGAT 3'
Specificity	FAM primer specific to C allele, and VIC primer specific to T allele.
Sequence	BS00000346_51