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GrainGenes Marker Report: IWB5850

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Locus	IWB5850
Type	SNP
Synonym	Other name BS00003622 BS00003622_51 Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm	6B
Map	Wheat, Yr genes and QTL 6A 1.7 Wheat_2014_90KSNP_6B 0.374793 Wheat_AB, Mohawk x Cocorit69 6A_1 0 Wheat_AB_2015_Consensus-6A 0.3 Wheat_Yr_2021-6A 4.66
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Map Data	Wheat, Yr genes and QTL Wheat, Yr Update, 2021 Wheat_2014_90KSNP Wheat_AB, Mohawk x Cocorit69 Wheat_AB_2015_Consensus
Species	Triticum aestivum
Probe	BS00003622_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Possible Orthologs	IWB5850a IWB5850b IWB5850-6B IWB5850-6A
Probe	BS00003622_51
Locus	[ Hide all but 1 of 7 ] IWB5850 BS00003622 BS00003622_51 IWB5850-6B IWB5850-6A IWB5850a IWB5850b
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796. Allen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type	SNP KASP
PCR primers	FAM 5' TGGATCCTCTGGTCGACCGAT 3' Common 5' CGGGACAAATGTGTGTCAATATCTACATT 3' VIC 5' GGATCCTCTGGTCGACCGAC 3' Common 5' CGGGACAAATGTGTGTCAATATCTACATT 3'
Specificity	FAM primer specific to A allele, and VIC primer specific to G allele.
Sequence	BS00003622_51