Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: IWB5860

[Submit comment/correction]

Locus	IWB5860
Type	SNP
Synonym	Other name BS00003659 BS00003659_51 Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm	6B
Map	Wheat_2014_90KSNP_6B 0.374793
	[ Show Nearby Loci ]
Map Data	Wheat_2014_90KSNP
Species	Triticum aestivum
Probe	BS00003659_51
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Possible Orthologs	IWB5860a IWB5860b IWB5860-6B
Probe	BS00003659_51
Locus	[ Hide all but 1 of 6 ] IWB5860 BS00003659 BS00003659_51 IWB5860-6B IWB5860a IWB5860b
Related Probe	AX-94837594 BA00276672
Reference	Wang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796. Allen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type	SNP KASP
PCR primers	FAM 5' CCGGTTCCTCCAAGGGCCA 3' Common 5' GAGAATATGCCGGACGCCGCAT 3' VIC 5' CGGTTCCTCCAAGGGCCG 3' Common 5' GAGAATATGCCGGACGCCGCAT 3'
Specificity	FAM primer specific to A allele, and VIC primer specific to G allele.
Sequence	BS00003659_51