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GrainGenes Marker Report: LoxA

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Locus
LoxA
Type
RFLP
Chromosome
4H
Map
Barley-ConsensusFHB-4H30.69
[ Show all 6 ]
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Map Data
[ Hide all but 1 of 6 ]
Barley, BinMap 2005
Barley, Consensus 2006, Marcel
Barley, Consensus 2007, SSR
Barley, Consensus 2023, FHB
Barley, Integrated, Marcel 2009
Barley, IxF
Species
Hordeum vulgare
Probe
LoxA
Candidate Gene
Lpx1 (Hordeum)
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Igri x Franka
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'


Gene Candidate for Locus
Lpx1 (Hordeum)
Synonym
SynonymLpx-H1 (Hordeum)
Gene Class
Lipoxygenase
Candidate Locus
LoxA
Chromosome
4H
Clone
pLOX1/30
Info Source
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.


Probe
LoxA
Locus
LoxA
LoxA-4H
Reference
Referencevan Mechelen JR et al. (1997) Cloning and Mapping of a Putative Barley NADPH-Dependent HC-Toxin Reductase. Molecular Plant Microbe Interactions 10:234.
ReferenceGraner A and van Mechelen JR (1992) Genomic mapping of lipoxygenase genes. Barley Genetics Newsletter 22:15-17.
Remarks
Identified with antibodies derived from the barley lipoxygenase 1 protein.
Type
cDNA
Source Species
Hordeum vulgare