Query (optional)   in Class  

GrainGenes Marker Report: MWG2028

[Submit comment/correction]

Locus
MWG2028
Type
RFLP
Synonym
SynonymMWG2028
Chromosome
1H
Chromosome Arm
1HL
Map
[ Hide all but 1 of 15 ]
Barley-Consensus-1H96.2
Barley-Consensus2-1H136
Hordeum-Bins-1H136
Hordeum-Consensus2005-SNP-1H134.772
Hordeum-Genes-1H-40.3
Hordeum-Graner2-1H111.2
Hordeum-OWB-1H119.2
Hordeum-OWB-2004-1H123.9
Hordeum-OWB-2005-1H120.8
Hordeum-OWB-OPA2008-1H140.96
Hordeum-OWB-SNP-1H120.19
Hordeum-QTLConsensus-Abiotic-1H134.77
Hordeum-QTLConsensus-Agronomic-1H134.77
Hv-Consensus2006-Marcel-1H122.66
Hv-Integrated2009-1H124.5
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 15 ]
Species
Hordeum vulgare
Probe
MWG2028
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys,Igri x Franka
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec; Igri x Franka
Possible Orthologs
MWG2028-1H
Xmwg2028


Probe
MWG2028
Locus
MWG2028
Xmwg2028
MWG2028-1H
Type
Genomic
STS
STS primers
5' GCTCACATCAATGTGTTCCGACAGC
5' CATGAAGGAAGGCACCACGACTGAA
STS size
242
Amplification Conditions
STS annealing temperature 60-62 oC
Sequence
AJ234716
AJ234715
MWG2028-5
MWG2028-3
Insert Enzyme
PstI
Source Species
Hordeum vulgare