GrainGenes Marker Report: MWG503
Locus
MWG503
Type
RFLP STS
Synonym
Synonym MWG503
Chromosome
2H
Chromosome Arm
2HL
Map
Barley-consensus-2003-2H 94.9
[ Show all 37 ]
[ Show Nearby Loci ]
QTL with Locus Marker
MetaQ.FHB_2H_34
[ Show all 22 ]
Map Data
Barley consensus
[ Show all 36 ]
2 Point Data
MWG503/Xris45c Distance: 9 cM v/MWG503 Distance: 10 cM
Species
Hordeum vulgare
Probe
MWG503
Reference
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 8 ]
Data Source
Blake, Tom 05.04.19 Close, Timothy J. Langridge, Peter J.
Remark
Number of populations contributing to the placement of MWG503 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG503(A) MWG503(B) MWG503-2H Xmwg503 Xmwg503-2
Probe
MWG503
Locus
[ Hide all but 1 of 7 ] Xmwg503-2 MWG503 HI083P8 Xmwg503 MWG503-2H MWG503(B) MWG503(A)
Synonym
Synonym HAR35_18355
Reference
Graner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic STS
PCR primers
MWG503T3 GTCGTCAGAGCCCACGCCAC
MWG503T7 TCCAAGCGGCAACCATCCCG
STS primers
5' CGCCACACGTAGAGTATGTT
5' GACGACCAGATCAAGCATGA
STS size
413
Amplification Conditions
STS annealing temperature 52-55 oC
Sequence
AJ234472 MWG503 MWG503-5
Linkage Group
2
Insert Enzyme
PstI
Source Species
Hordeum vulgare
Insert Size
0.6
GrainGenes Marker Report: MWG503
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