GrainGenes Marker Report: MWG503
Locus
MWG503
Type
RFLP STS
Synonym
Synonym MWG503
Chromosome
2H
Chromosome Arm
2HL
Map
Barley-consensus-2003-2H 94.9
[ Show all 37 ]
[ Show Nearby Loci ]
QTL with Locus Marker
MetaQ.FHB_2H_34
[ Show all 22 ]
Map Data
Barley consensus
[ Show all 36 ]
2 Point Data
MWG503/Xris45c Distance: 9 cM v/MWG503 Distance: 10 cM
Species
Hordeum vulgare
Probe
MWG503
Reference
[ Hide all but 1 of 8 ] 
Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source
Blake, Tom 05.04.19 Close, Timothy J. Langridge, Peter J.
Remark
Number of populations contributing to the placement of MWG503 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec; Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG503(A) MWG503(B) MWG503-2H Xmwg503 Xmwg503-2
Probe
MWG503
Locus
Xmwg503-2
[ Show all 7 ]
Synonym
Synonym HAR35_18355
Reference
Graner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic STS
PCR primers
MWG503T3 GTCGTCAGAGCCCACGCCAC
MWG503T7 TCCAAGCGGCAACCATCCCG
STS primers
5' CGCCACACGTAGAGTATGTT
5' GACGACCAGATCAAGCATGA
STS size
413
Amplification Conditions
STS annealing temperature 52-55 oC
Sequence
AJ234472 MWG503 MWG503-5
Linkage Group
2
Insert Enzyme
PstI
Source Species
Hordeum vulgare
Insert Size
0.6
GrainGenes Marker Report: MWG503
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
| |||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
| ||||||||||||||||||||||||||
|
|