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GrainGenes Marker Report: MWG514B

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Locus	MWG514B
Type	RFLP
Synonym	Synonym MWG514
Chromosome	5H
Map	Barley-Consensus2-5H 133.7 [ Show all 17 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QSss.StMo-5H.1
Map Data	Barley consensus 2 [ Show all 17 ]
Species	Hordeum vulgare
Probe	MWG514
Reference	[ Hide all but 1 of 6 ] Close TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582. Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source	Blake, Tom 05.04.19 Close, Timothy J.
Remark	Number of populations contributing to the placement of MWG514B in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs	MWG514 MWG514A MWG514b-5H Xmwg514 Xmwg514-3R
Probe for Locus	MWG514
Locus	MWG514 [ Show all 6 ]
Reference	Graner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type	Genomic STS
STS primers	5' GTGCATTAATACAGTGCCCA 5' CACAAACGTTACGAGTACAG
STS size	472
Amplification Conditions	STS annealing temperature 50-52 oC
Sequence	AJ234478 AJ234477 MWG514-5 MWG514-3
Linkage Group	5H
Insert Enzyme	PstI
Source Species	Hordeum vulgare
Insert Size	1