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GrainGenes Marker Report: MWG620

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Locus	MWG620
Type	RFLP STS
Synonym	Synonym MWG620
Chromosome	6H
Chromosome Arm	6HS
Map	[ Hide all but 1 of 22 ] Barley-Consensus-6H -53.3 Barley-Consensus2-6H 6.9 Barley-ConsensusFHB-6H 14.5 Hordeum-Bins-6H 6.7 Hordeum-Consensus2005-SNP-6H 15.194 Hordeum-Consensus2006-DArT-6H 7.2 Hordeum-Graner1-6H 19 Hordeum-NABGMP1-6H 6.6 Hordeum-OWB-2004-6H 0 Hordeum-OWB-2005-6H 0 Hordeum-OWB-6H 4 Hordeum-OWB-SNP-6H 0 Hordeum-QTLConsensus-Abiotic-6H 15.19 Hordeum-QTLConsensus-Agronomic-6H 15.19 Hordeum-StMo-SNP-6H 6.89 Hordeum-SxM-base-6H 6.8 Hordeum-SxM-FeedQTL-6H 6.6 Hordeum-SxM-SSAP-6H 7.1 Hordeum-SxM-SSR-6H 4.8 Hv-Consensus2006-Marcel-6H 8.6 Hv-HNxH602-6H 0 Hv-Integrated2009-6H 6.1
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 22 ]
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	MWG620
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Li JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source	Blake, Tom 05.04.19
Remark	Number of populations contributing to the placement of MWG620 in the Barley, Consensus 2006 DArT maps = 2 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Possible Orthologs	MWG620-6H Xmwg620-6A
Probe	MWG620
Locus	MWG620 Xmwg620-6A MWG620-6H
Reference	Sayed-Tabatabaei BE et al. (1998) DNA sequencing and primer designing for RFLP clones evenly distributed in the barley genome. Barley Genetics Newsletter 28:15-18. Graner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type	Genomic STS
STS primers	T7 side (5' to 3') TGGTACACGGGGAAGAAATGGATTG T3 side (5' to 3') AAATCTCCCTTGGTCAGTCCGCAGT
Sequence	MWG620
Linkage Group	6H
Source Species	Hordeum vulgare
Insert Size	1