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GrainGenes Marker Report: MWG634

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Locus
MWG634
Type
CAPS
RFLP
Synonym
SynonymMWG634
Chromosome
4H
Chromosome Arm
4HS
Map
Barley-Consensus-4H-59.1
[ Show all 27 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QSsg.StMo-4H
Map Data
[ Hide all but 1 of 27 ]
Barley consensus
Barley consensus 2
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, BinMap 2005
Barley, Consensus 2005, SNP
Barley, Consensus 2006, DArT
Barley, Consensus 2006, Marcel
Barley, Consensus 2007, SSR
Barley, Consensus 2023, FHB
Barley, FxS, FHB QTL
Barley, HxM/QTL
Barley, Integrated, Marcel 2009
Barley, Nure x Tremois
Barley, OPA 2009, Consensus
Barley, OWB
Barley, OWB, 2004
Barley, OWB, 2005
Barley, OWB, OPA2008
Barley, OWB, SNP
Barley, Pilot OPA1, Consensus
Barley, Steptoe x Morex, SNP
Barley, Steptoe x Morex, SSAP
Barley, SxM
Barley, SxM basemap
Barley, SxM, Feed QTLs
Barley, VxHs
Species
Hordeum vulgare
Probe
MWG634
Reference
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
[ Show all 7 ]
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of MWG634 in the Barley, Consensus 2006 DArT maps = 2
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys,Nure x Tremois
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
MWG634-4H
[ Show all 16 ]



Probe
MWG634
Locus
Xmwg634.2-4A
[ Show all 17 ]
Reference
ReferenceSayed-Tabatabaei BE et al. (1998) DNA sequencing and primer designing for RFLP clones evenly distributed in the barley genome. Barley Genetics Newsletter 28:15-18.
ReferenceGraner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic
STS
STS primers
T7 side (5' to 3') GTGCTGGGTGGATTAAAAAAGAGGG
T3 side (5' to 3') GAACTAAAGATAGGCGGGAGTACTG
Sequence
AJ234549
AJ234548
MWG634
MWG634-5
MWG634-3
Linkage Group
?
Source Species
Hordeum vulgare
Insert Size
0.7