Query (optional)   in Class  

GrainGenes Marker Report: MWG635C

[Submit comment/correction]

Locus
MWG635C
Type
RFLP
Synonym
SynonymMWG635
Chromosome
1H
Map
[ Hide all but 1 of 11 ]
Barley-Consensus2-1H139.9
Hordeum-Bins-1H145.8
Hordeum-Consensus2005-SNP-1H138.419
Hordeum-Genes-1H-50.9
Hordeum-NABGMP1-1H138.9
Hordeum-QTLConsensus-Abiotic-1H138.42
Hordeum-QTLConsensus-Agronomic-1H138.42
Hordeum-StMo-SNP-1H146.28
Hordeum-SxM-FeedQTL-1H138.9
Hv-Consensus2006-Marcel-1H126.37
Hv-Integrated2009-1H128.1
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 11 ]
Probe
MWG635
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source
Blake, Tom05.04.19
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
MWG635
[ Show all 7 ]



Probe for Locus
MWG635
Locus
MWG635C
[ Show all 10 ]
Synonym
SynonymHAR35_27222
HAR35_27940
Reference
ReferenceGraner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
Genomic
STS
STS primers
5' ACCGACGCAGACCTTCAG
5' TCAAGACCATGAAGCACGAG
STS size
178
Amplification Conditions
STS annealing temperature 58-60 oC
Sequence
AJ234550
MWG635-5
MWG635-3
Insert Enzyme
PstI
Source Species
Hordeum vulgare