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GrainGenes Marker Report: MWG635b

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Locus	MWG635b
Type	RFLP
Synonym	Synonym MWG635
Chromosome	1H 5H 7H
Map	[ Hide all but 1 of 18 ] Barley-Consensus2-7H 143.1 Barley-ConsensusFHB-5H 40.03 Hordeum-Bins-7H 143.6 Hordeum-Consensus2005-SNP-7H 151.934 Hordeum-Consensus2006-DArT-7H 163 Hordeum-FxS-FHB-QTL-5H 61.4 Hordeum-Giese2-1H 148 Hordeum-HxT-base-7H 186.9 Hordeum-NABGMP1-7H 168.8 Hordeum-NABGMP2-7H 198.2 Hordeum-QTLConsensus-Abiotic-7H 151.93 Hordeum-QTLConsensus-Agronomic-7H 151.93 Hordeum-StMo-SNP-7H 138.19 Hordeum-SxM-base-7H 167.7 Hordeum-SxM-FeedQTL-7H 168.8 Hordeum-SxM-SSAP-7H 146.6 Hv-Consensus2006-Marcel-7H 150.36 Hv-Integrated2009-7H 149.2
	[ Show Nearby Loci ]
QTL with Locus Marker	MetaQ.HD_5H_1 QHD.umn-5H.1
Map Data	Barley consensus 2 [ Show all 18 ]
Probe	MWG635
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Mesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Data Source	Blake, Tom 05.04.19
Remark	Number of populations contributing to the placement of MWG635B in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs	MWG635 [ Show all 7 ]
Probe for Locus	MWG635
Locus	MWG635C [ Show all 10 ]
Synonym	Synonym HAR35_27222 HAR35_27940
Reference	Graner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type	Genomic STS
STS primers	5' ACCGACGCAGACCTTCAG 5' TCAAGACCATGAAGCACGAG
STS size	178
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	AJ234550 MWG635-5 MWG635-3
Insert Enzyme	PstI
Source Species	Hordeum vulgare